Results for "graph"
Top-level pages
List of visualization tools for network biology
...ion for any network and complex system, dynamic and hierarchical graph. https://gephi.org Igraph Collection of network analys...iagrams manually and import external data http://tinyurl.com/yEdGraph/ Web tools for network analy...2280 days ago
List of visualization tools for genome alignments
...tion tools, which could be useful for analysis and interpretation of results: ABySS Explorer Interactive Java application that uses a novel graph-based representation to displ...2275 days ago
Some useful Bioinformatics links
...ram https://mafft.cbrc.jp/alignment/software/tips.html Omega | Overlap-graph de novo Assembler for Metagen...05-15-302 Fast and sensitive mapping of nanopore sequencing reads with GraphMap | Nature Communications h...2233 days ago
Bioinformatics tools for genome assembly !
...parallelized assembler for large genomes that uses de Bruijn graphs. Velvet: Another de Bruijn graph-based assembler optimized for...circular bacterial genome assembly. wtdbg2: A de Bruijn graph assembler for long reads, eff...278 days ago
Mitochondrial genome assembly tools !
...especially when dealing with complex datasets that may contain nuclear mitochondrial DNA sequences (numts). IDBA-UD: IDBA-UD (Iterative De Bruijn Graph De Novo Assembler) is another...234 days ago
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