Results for "host"
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HTTDB - Horizontally transferred transposable elements database
...and does not contribute to the survival of the host that it inhabits, they are kn...re has been no easy way to visualise each TE or host species, and should be furthe...e integration a viral genomic fragment into the host genome. https://www.ncbi.nlm...2300 days ago
Seq: A high-performance, Pythonic language for bioinformatics
Seq is a programming language for computational genomics and bioinformatics. With a Python-compatible syntax and a host of domain-specific features and optimizations, Seq mak...1631 days ago
ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis
...ches: Experiments in which a limited number of species are defined ahead of time, such as those involving Patient-Derived Xenografts (PDXs) or host-pathogen interactions. Refere...1515 days ago
ShadowCaster: a hybrid approach for the detection of horizontal gene transfer events in prokaryotes
...ts an evolutionary model to calculate Bayesian likelihoods for each ‘alien genes’ with an unusual sequence composition according to the host genome background to detect H...1398 days ago
- ...p;assembly program targeting populations with high mutation rates. It creates a single linear representation of the mixed population on which intra-host variants can be mapped. For c...
1356 days ago
What is the hologenome concept of evolution?
...es and their influence on the ecology and evolution of their macroscopic hosts has only recently become possible. One approach to thinking about the topic is to view the host–microbiome ecosystem as...1193 days ago
odgi: optimized dynamic genome/graph implementation
odgi provides an efficient and succinct dynamic DNA sequence graph model, as well as a host of algorithms that allow the use of such graphs in bioinformatic analyses. Careful e...830 days ago
