Software packages for next gen sequence analysis
...icient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of 25 millio...ed tool that aligns short sequences to a sequence database, such as the human reference genome. By default,...3240 days ago
2712 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...tributes”; based on clinically oriented Alamut database; Supports human genes; easy to integrate into...“decision tree” and illustrated figures and animations Human Splicing Finder Descriptio...2907 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...gencies or other foundations with specialized missions. Human Frontier Science Program: Research grants from the Human Frontier Science Program are...ces the engineering arts and sciences for the welfare of humanity. It supports engineering a...2936 days ago
Tools for Searching Repeats And Palindromic Sequences
...sitance of a reverse transcriptase.DNA TransposonsRetrovirus RetrotransposonsNon-Retrovirus Retrotransposons ( LINES ) Currently up to 50% of the human genome is repetitive in natur...2209 days ago
2867 days ago
Genome Assembly Tools and Software - PART1 !!
...elera Assembler contributed the first diploid sequence of an individual human, and metagenomics assemblies...cations including de novo gene sequencing, mutation detection, forensic human identification, systematics,...2684 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...k-mer based) Software (Python) https://github.com/danielnavarrogomez/phy-mer LAVA Genotyping of known SNPs (dbSNP and Affymetrix's Genome-Wide Human SNP Array) from raw NGS reads...2369 days ago
Single Cell RNAseq data analysis tutorial !!
...data separate biological drivers from confounding effects http://biorxiv.org/content/early/2016/11/15/087775 Single cell transcriptomes identify human islet cell signatures and rev...2349 days ago
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
...h best. This is different than with ordinary mapping. If a genome (say, human) contains an exact repeat som...ed ambiguously. But if you want to determine whether reads are mouse or human, it does not matter whether t...2312 days ago