2082 days ago
BioGPS: Spotlight on the Gene Expression Atlas
BioGPS opened 2016 with a publication in Nucleic Acids Research, right after the New Year holiday. Throughout the year, new designs for the site were being created, re...2039 days ago
Wtdbg2: a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore
Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or...builds the consensus from intermediate assembly output. Wtdbg2 is able to assemble the human...2038 days ago
NovoGraph: building whole genome graphs from long-read-based de novo assemblies
NovoGraph: building whole genome graphs from long-read-based de novo assemblies An algorit...en provide a proof of principle by creating a genome graph of seven ethnically-diverse human...2011 days ago
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
kallisto is a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data, or more generally of target sequences using high-t...tandard RNA-Seq data, kallisto can quantify 30 million human...1958 days ago
1945 days ago
DISTRUCT: a program for the graphical display of population structure
distruct is a program that can be used to graphically display results produced by the...ividual membership coefficients in the same form as used in "Genetic structure of human...1881 days ago
HumCFS: a database of fragile sites in human chromosomes
Fragile sites are specific chromosomal region that exhibit an increased f...requency of chromosdomal breakge when cells are exposed to replicative st...vidence suggests their involvement in human pathologies and they have be...here is large gap in our knowledge of human...1854 days ago
simuG: a general-purpose genome simulator
Simulated genomes with pre-defined and random genomic variants can be very useful for bench...ons, copy number variants, inversions and translocations) for any organisms (including human...1633 days ago
Genome in a Bottle (GIAB) Consortium
The Genome in a Bottle (GIAB) Consortium is a public-private-academic consortium hosted by...rence standards, reference methods, and reference data) to enable translation of whole human...1575 days ago