Results for "improvements"
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Collection of molecular modelling and drug design related tutorial ...
...y a large developer community and enjoys a diverse user base. Each year Rosetta developers and users from academia and industry meet to discuss improvements and new code, as well as exci...3829 days ago
- ...Pilon uses read alignment analysis to identify inconsistencies between the input genome and the evidence in the reads. It then attempts to make improvements to the input genome, includin...
3018 days ago
OPERA : Optimal Paired-End Read Assembler
...re important for scaffolding large genomes (multi-library support, better repeat-handling etc.), in addition to other scalability and usability improvements (bam and gzip support, smalle...2804 days ago
- ...t of programs to exploit optical maps for assembly can be found here: SOMA v2.0 (63 MB tar.gz file). This version of SOMA contains several improvements to programs in v1.0 as well a...
2551 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
...es are much more accurate. In addition, on the whole data set (assembled in ~30 min), the miniasm N50 is reduced to 1.79Mb. Miniasm still needs improvements. Miniasm confirms that at le...2360 days ago
ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
ETE v3, featuring numerous improvements in the underlying library of methods, and providing a novel set of standalone tools to perform common tasks in comparative genomics and phylogen...2276 days ago
SALSA: A tool to scaffold long read assemblies with Hi-C
This code is used to scaffold your assemblies using Hi-C data. This version implements some improvements in the original SALSA algorithm. If you want to use the old version, it can be fo...2160 days ago
- ...n genetics and bioinformatics research. Trans-disciplinary research being conducted in our laboratories would lead to cures for human diseases; improvements to crop and livestock quality...
2078 days ago
MSAProbs - Parallel and accurate multiple sequence alignment
...obabilities. Assessed using the popular benchmarks: BAliBASE, PREFAB, SABmark and OXBENCH, MSAProbs achieves statistically significant accuracy improvements over the existing top perform...1771 days ago
MEC: Contig Misassembly Correction
...ts to analyze the influence of MEC on scaffolding results, which shows that MEC can reduce misassemblies effectively and result in quantitative improvements in scaffolding quality. MEC i...1561 days ago
