List of In-silico Binding Site Prediction Tools
...CASTp includes a graphical user interface, flexible interactive visuali...by clusters of residues, at the interface of protein-protein interactio...emplates as inputs. A simple web interface is also provided allowing acc...ignment of protein–protein interfaces (PPIs), which are regions of...3752 days ago
Next generation sequencing in R or bioconductor environment
...tation rtracklayer rtracklayer provides an interface for exporting annotation feat...n biomaRt The biomaRt package, provides an interface to a growing collection of da...w Cell Quality Visualization rtracklayer: R interface to genome browsers genoPlotR...3633 days ago
Commercial and public next-gen-seq (NGS) software
...ntly solving large scale sequence matching tasks. Vmatch subsumes the software tool REPuter, but is much more general, with a very flexible user interface, and improved space and time...3527 days ago
A guide for complete R beginners !
...to turn it into an automated script to perform again and again on different data Disadvantages Lack of a comprehensive graphical user interface, but two do exist: However so...3369 days ago
Software packages for next gen sequence analysis
...ntly solving large scale sequence matching tasks. Vmatch subsumes the software tool REPuter, but is much more general, with a very flexible user interface, and improved space and time...3251 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ver Easy to use point-and-click interface Takes NGS data (.fastq, BAM,...ata visualization, drag and drop interface, accelerated analysis, real-t...application with graphical user interface as part of pipeline system&rd...s; package program, command line interface; estimates variance by all SN...2917 days ago
Genome Assembly Tools and Software - PART1 !!
...and High Performance Computing resources. It can be used as a single interface to several popular assemblers...equence quality scores, while offering a familiar, easy-to-learn user interface. Cerulean 0.1.1 –...2694 days ago
Awesome perl frameworks, libraries and software - PART 1
...nsistent application programming interface to the World-Wide Web. The ma...land/perl-net-github - Perl interface to GitHub Perl-Critic/Perl-C...nbsp;- DBI - The Perl 5 Database Interface masterzen/mysql-snmp -...dule leto/math--gsl - Perl interface to the GNU Scientific Library...2497 days ago
Edit distance application in bioinformatics !
...of operations for partial or fuzzy matching of text based on edit distance. Text::Fuzzy::PP is a pure perl implementation of the same interface. String::Similarity tak...2349 days ago
Bioinformatics Web Application Development with Perl
...nd server side programming, with rich client interfaces and powerful backends. Perl...on. Its design allows it to provide the same interface to huge relational databases...ces, development tools, testing systems, and interfaces to document formats and exte...2330 days ago