Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed subs...tection in next generation sequencing data (paired end mapping, split re...e: NatRev Genetics) Related tools, databases and publications are lis...and visualization in deep sequencing data Link PEMer, structu...2714 days ago
Important Journals, Blogs and Forums for Bioinformaticians
Journals. Most journals have RSS feeds for their current updat...Variance Explained: David Robinson’s blog (Data Scientist at Stack Overflow,...en Sequencing Blog covering new developments in NGS data & analysis. RNA-Seq Blog...2655 days ago
Software and Tools to detect structure variation with long reads !!
Uncovering the connection between genetics and heritable disea...ios reveals triple the SVs detectable by short-read data. With Single Molecule,...structural variants from next-generation paired end data, third-generation long read d...2620 days ago
List of GOI approved peer reviewed bioinformatics and computational biology journals
Unfortunately, we now live in a world where the integrity of peer-reviewed journals is be...y, Genetics and Molecular Biology; Medicine, Health International Journal o f Data M ining and Bioinformatics Wo...2579 days ago
2542 days ago
DNA testing companies around the globe !
It was realized in the 1940s that DNA molecules are passed down through the generations o...Research Inc (DTC whole exome sequencing; consumer focused healthcare big data spin out from Complete Genomi...2499 days ago
List of genome announcement, notes and reporting journals
Faced with an increasing number of articles describing DNA data and a need for more appropriate venues to present these data, some publishers and journals ha...supplemental material to present data or analysis. Link: https://m...nt organism in the corresponding database (for eukaryotes, advanced...2020 days ago
String graph based genome assembly software and tools !
In graph theory, a string grap...mbling large genomes from NGS data caught our attention for seve...from high coverage short read data. SGA is designed as a modular...s paired end and/or mate pair data to build scaffolds from the c...arge genomes using compressed data structures - Jared T. Simpson...2340 days ago
List of cancer genomics research web resources !
Major web resources for cancer genomics resea...ps://cghub.ucsc.edu/ Comprehensive data repository; huge data size EGA https://www.ebi.ac....ger.ac.uk Largest somatic mutation database; genome sequencing paper...hensive analysis of tumor profile; Data from 90 studies involving mor...2332 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time de...Gb of DNA sequence data. Ultra-long read lengths are...e technical advantages of ONT data is the read length, which off...developed for Oxford Nanopore data BWA Fast nanopore data tuned...on tool for nanopore sequence datahttps://github.com/jgurtowski/...2332 days ago