Results for "iontorrent data"
Top-level pages
Since few years miRNA has shown to play important role in ther...DBs and tools related with miRNA: miRNA Sequencing data analysis : http://tools....prediction.html Idea of analysing miRNA Sequencing data : http://www.illumina.com/ap...3508 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS...teractions, COSMIC mutations, and CNV data for cell lines. Does not require a network connection for local databases. View and search PubMed...ed, Genomic Variations and many other databases to retrieve up-to-date a...3553 days ago
- Pathway Analysis is usually performed with aim t...omics, transcriptomics and proteomics data, interactions between genes i...ation in one of the pathway knowledge databases (KEGG,Reactome,Panther,B...c/Pathways_2014_Module2.pdf Impotant Database and Tools: GeneMANIA, Cy...
3508 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to the ba...ated script to perform again and again on different data Disadvantages Lack...ration (Optional) Download and save the tutorial data set from http://bioinforma...3373 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics W...short sequences to a sequence database, such as the human refere...functions to handle ABI SOLiD data. Written by Heng Li from the.... Supports Illumina and SOLiD data. De novo Align/Assemble * AB...nding sites based on ChIP-Seq data. (C++) * SISSRs - Site Identi...3254 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a ke...one leading method in -omics data analysis and visualization....work targeted at biomolecular data. Visualization of interdepend...bsp; Visualizing multi-omics data in metabolic networks https:...ronment composed of a central database and a visual editor, buil...2299 days ago
- Reformat is a member of the BBMap/BBTools package. It is a mul...l designed for converting reads or other nucleotide data between different formats. It...erleaved files It is multithreaded and can process data at over 500 megabytes per sec...
2726 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...quo;one can import the sample data in FASTA, FASTQ or tag-count format. In addition, prealigned data in SAM, BAM or Illumina-speci...om high-throughput sequencing datasets; calls variants found in...”; no actual expression data used, only in silico expressi...2920 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 ...n.txt) Note: You can download GTF files from http://www.ensembl.org/info/data/ftp/index.html
2118 days ago
- alignment: the mapping of a raw sequence...ressed format for storing SAM data. BCF Format: Binary call for...ressed format for storing VCF data. CIGAR String: Compact Idios...rmat for storing raw sequence data. For example, the FASTA file...des multiple elements of meta-data regarding a read and its alig...
2881 days ago
