2267 days ago
Estimate Genome Size with Jellyfish and R
...umber of treads to be used in the run. eg: 1,2,3,..etc. #-C -both-strands Count both strands #-m -mer-len=unit32 Length of the k-mer #-s -size=unit32...2248 days ago
2130 days ago
931 days ago
Bash script to simulate a genome !
...6/reformat.sh \ in=illumina1.fastq.gz in2=illumina2.fastq.gz out=illumina.int.fastq 2>/dev/null # use KmerGenie 1.7051 to get an idea of k-mer with that produces longest N5...920 days ago