Results for "linux"
Bookmarks
Bandage: interactive visualization of de novo genome assemblies
...tion: Source code and binaries are freely available at https://github.com/rrwick/Bandage. Bandage is implemented in C++ and supported on Linux, OS X and Windows. A full fea...2343 days ago
Mash: fast genome and metagenome distance estimation using MinHash
Mash is normally distributed as a dependency-free binary for Linux or OSX (see https://github.com/marbl/Mash/releases). This source distribution is intended for other operating...2335 days ago
xmatchview: smith-waterman alignment visualization
...mat using cross_match and displays the alignment in a variety of image formats. xmatchview and xmatchview-conifer are written in python and run on linux and windows. They serve as vi...2319 days ago
MMseqs2.0: ultra fast and sensitive protein search and clustering suite
...arching) is a software suite to search and cluster huge protein sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version,...2235 days ago
NanoPack: visualizing and processing long-read sequencing data
....com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsystem for Linux and are available as a graphi...2094 days ago
STELLAR: fast and exact local alignments
STELLAR is very practical and fast on very long sequences which makes it a suitable new tool for finding local alignments between genomic sequences under the edit distance model. Binaries are freely available for Linux, Windows, and Mac OS X at http://www.seqan.de/projects/stellar.2075 days ago
nQuire: a statistical framework for ploidy estimation using next generation sequencing
...artificial selection experiments, and for historical or ancient samples where intact nuclei are not preserved. It is implemented as a stand-alone Linux command line tool in the C pr...2039 days ago
ANItools web: a web tool for fast genome comparison within multiple bacterial strains
ANItools is a software package written by PERL scripts that can be run in a Linux/Unix system. If you want to compare bacterial genomes and calculate their average nucleotide identit...1998 days ago
NanoPack: visualizing and processing long-read sequencing data
....com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsystem for Linux and are available as a graphi...1956 days ago
Osprey: Network Visualization System
...the BioGRID family of software. It utilizes both MySQL and Java to operate and is compatible with Windows, Linux, and Apple operatin...1931 days ago
