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Results for "linux"

Bio-Scripts

• • Jit@jit.aber

  

  Install fastqc using conda !

  (JitMetaENV) ➜ JitMeta conda install -c bioconda fastqc Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1216 days ago

• • Jit@jit.aber

  

  Install spades using conda !

  (JitMetaENV) ➜ fastQC_out conda install -c bioconda spades Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1216 days ago

• • Jit@jit.aber

  

  Install assembly-stats with conda !

  (JitMetaENV) ➜ META_PE conda install -c bioconda assembly-stats Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1216 days ago

• • Jit@jit.aber

  

  Install Kraken2 using conda !

  (JitMetaENV) ➜ day2 conda install -c bioconda kraken2 Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solv...

  1216 days ago

• • Jit@jit.aber

  

  Install prokka using conda !

  (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen s...

  1215 days ago

• • Jit@jit.aber

  

  Install seqtk using conda !

  (JitMetaENV) ➜ META_PE conda install -c bioconda seqtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1215 days ago

• • Jit@jit.aber

  

  Install bwa using conda !

  (JitMetaENV) ➜ assembly conda install -c bioconda bwa Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1215 days ago

• • Jit@jit.aber

  

  Install maxbin2 using conda !

  (JitMetaENV) ➜ day3 conda install -c bioconda maxbin2 Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solv...

  1214 days ago

• • Jit@jit.aber

  

  Install wgd cli on linux !

  ...Downloading fastcluster-1.1.25-cp36-cp36m-manylinux1_x86_64.whl (153 kB) |█....1 Downloading pandas-0.24.1-cp36-cp36m-manylinux1_x86_64.whl (10.1 MB) |...Downloading scikit_learn-0.24.0-cp36-cp36m-manylinux2010_x86_64.whl (22.2 MB)...

  1208 days ago

• • Jit@jit.aber

  

  Install gffread using Conda !

  ...Total: 8.9 MB The following NEW packages will be INSTALLED: _libgcc_mutex pkgs/main/linux-64::_libgcc_mutex-0.1-main gffread bioconda/linux-64::gffread-0.12.1-h8b12597_0...

  1203 days ago

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