Results for "local"
Bio-Scripts
Perl script to extract sequence by Ids from multifasta file !
...idsfile = "$ARGV[0]"; my $seqfile = "$ARGV[1]"; my %ids = (); open FILE, $idsfile; while() { chomp; $ids{$_} += 1; } close FILE; local $/ = "\n>"; # read by FASTA...2092 days ago
- ...ge template for all tools (uses --spark-runner LOCAL when used with a Spark tool)...k tools are run valid targets are: LOCAL: run using the in-memory...Call germline SNPs and indels via local re-assembly of haplotypes...
2071 days ago
- ...delta 214), pack-reused 0 Receiving objects: 100% (484/484), 87.73 KiB | 10.97 MiB/s, done. Resolving deltas: 100% (290/290), completed with 127 local objects. From https://github...
2071 days ago
Perl script to extract a sequence from multifasta with range !
...$minlen = shift or die "Error: `minlen` parameter not provided\n"; my $maxlen = shift or die "Error: `maxlen` parameter not provided\n"; { local $/=">"; while() {...2062 days ago
- ...0 FALCON-examples]$ ../git-sym/git-sym update run/greg200k-sv2/ mkdir -p /home/users/j/n/jnarayan/FALCON-examples/.git/git-sym-local/links os.symlink('.git/git-sym-local/links', '/home/users/j/n/jnar...
2030 days ago
Installing Platypus on Ubuntu !
...-lpthread gcc -g -Wall -O2 -I. -c -o tabix.o tabix.c gcc -o tabix tabix.o libhts.a -lz -lm -lbz2 -llzma -lpthread mkdir -p -m 755 /usr/local/bin /usr/local/include /usr/local/include/ht...2015 days ago
- http://stackoverflow.com/questions/6373277/git-sync-local-repo-with-remote-one This makes your local repo exactly like your remote repo. Remember to replace origin and master with the remote and branch...
1978 days ago
- ...stro=Ubuntu&target_version=1804&target_type=deblocal $ wget https://developer.d...per.download.nvidia.com/compute/cuda/10.2/Prod/local_installers/cuda-repo-ubuntu18...per.download.nvidia.com/compute/cuda/10.2/Prod/local_installers/cuda-repo-ubuntu18...
1549 days ago
Installing ggplot2 and its dependencies on Ubuntu !
...R/lib -lR installing to /usr/local/lib/R/site-library/glue/libs....status: creating src/uconfig_local.h config.status: creating sr...via 'install.libs.R' to /usr/local/lib/R/site-library/stringi *...R/lib -lR installing to /usr/local/lib/R/site-library/digest/lib...1546 days ago
Installing docker for Bioinformatics on Ubuntu !
...images volume Manage volumes Commands: attach Attach local standard input, output, and e...s changes cp Copy files/folders between a container and the local filesystem create Cre...1509 days ago
