Results for "loci"
Blogs
Computer simulation of genetic mechanism !!
...netic Architecture Model Emulator for Testing and Evaluating Software: Simulates complex SNP models with pure, strict epistatic interactions with n-loci. http://sourceforge.net/proje...2991 days ago
Bioinformatics tools to explore SSRs in genomes !
...rganisms. QDD: QDD (Quick Detection of Duplication) is a software tool that can identify SSRs in DNA sequences and can also identify duplicate loci. It can be used to analyze ge...441 days ago
Bookmarks
RNA Sequencing Helps Identify Functional Variants from GWAS
...the obstacle. The challenge nowadays is figuring out how the identified loci relate to disease. As reporte...put RNA sequencing are providing new tools for understanding how disease loci influence gene expression&mda...3832 days ago
- Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-base...
3009 days ago
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Top-level pages
- ...mapping efforts. The field also includes studies of intragenomic phenomena such as heterosis, epistasis, pleiotropy and other interactions between loci and alleles within the genome...
3958 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...embly of RAD paired-end contigs using short sequencing reads. Etter et al., PLOS ONE 6(4): e18561, 2011. Full Text Stacks: building and genotyping loci de novo from short-read seque...3795 days ago
- +4 more Top-level pages
News
High Density Sheep SNP Genotyping Chip released!!!
...wide association studies and other applications such as genome-wide selection, determination of genetic merit, identification of quantitative trait loci, and comparative genetic stud...3913 days ago
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
...have a curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism sou...------- BLAST form with rRNA/ITS databases BLAST db download Targeted loci If you have any questions or...1549 days ago
ResearchLabs posts
- ...ical genetics, bioinformatics and population genetics. Her main area of research is linkage mapping, in humans and mice. Research Area: Mapping loci in ENU mutants in mice in com...
3964 days ago
Tags
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
MCBI have a curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism sources and current names. This set is critical for correctly identifying and classifying prokaryotic (bacteria and archaea) and fungal samples. To provide easy access to these sequences, ...Tags: Curated, ribosomal, RNA, rRNA, reference, sequences, targeted, loci, verifiable, organism, 16S, 18S, 28S, ribosomal, RNA
1549 days ago
Comments
Comment on "LAMSA: fast split read alignment with long approximate matches"
...reads. [1] -l --seed-len [INT] Length of seeding fragments. [50] -i --seed-inv [INT] Distance between neighboring seeding fragments. [100] -p --max-loci [INT] Maximum allowed number...2139 days ago
