Results for "master in bioinformatics"
Bio-Scripts
Create random 2 translocations in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuINV.simseq.genome.fa -translocation_count 2 -prefix simuTRANS [Sun Jan 10 17:12:58 2021] Starting simuG ....1221 days ago
- (JitMetaENV) ➜ wgd git:(master) pip install --user ERROR: You must give at least one...see "pip help install") (JitMetaENV) ➜ wgd git:(master) pip install --user . Proces....1.0 wgd-1.2 Then (JitMetaENV) ➜ wgd git:(master) export...
1217 days ago
Set up WGD environment using conda !
#Wgd cannot be installed directly with bioconda at present, so it is slightly troubles...l its deps #Follow the steps (base) ➜ wgd git:(master) conda create -n wgd python=...tl-2.1.0 tornado-6.1 wgd-1.2 (wgd) ➜ wgd git:(master) wgd z...1213 days ago
Install and set up i-adhore for synteny and wgd analysis ! -- step by step --
...(wgd) ➜ i-adhore-3.0.01 git:(master) ✗ tar -zxvf i-adhore-3.0.01....(wgd) ➜ i-adhore-3.0.01 git:(master) ✗ cd i-adhore-3.0.01 (wgd)...01/build (wgd) ➜ build git:(master) ✗ ls CMakeCache.txt CMakeF...isualize (wgd) ➜ build git:(master) ✗ make install [ 8%] Built target...1213 days ago
- (JitMetaENV) ➜ setu git:(master) ✗ conda install -c bioconda ragout Collecting package metadata (current_repodata.json): done Solving environment: failed with initial fr...
1158 days ago
Bash script to check installed bioinformatics program !
allTools=(bwa mummer trimomatic) decFlag=0; for name in ${allTools[@]}; do #echo "enter your package name" # read name dpkg -s $name &> /dev/null if...1056 days ago
- #R is a feature rich interpretive programming language originally released in 1995. It is heavily used in the bioinformatics community largely due to nume...
833 days ago
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