Results for "modified"
Blogs
Converting a VCF into a FASTA given some reference !
...tools (Heng Li) provides a Perl script vcfutils.pl which does this, the function vcf2fq (lines 469-528) This script has been modified by others to convert InDels a...2128 days ago
Bookmarks
Encode sequencing data freely available to download and use for academic means
...ia DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA, including modified histones and transcription fa...3717 days ago
- ...also including fungi and microbial eukaryotes. Kaiju translates reads into amino acid sequences, which are then searched in the database using a modified backward search on a memory-e...
2881 days ago
- +9 more Bookmarks
Pages
Find certain files/documents in Linux OS
...ind /home -user rahul -iname "*.txt"Part IV – Find Files and Directories Based on Date and Time26. Find Last 50 Days Modified FilesTo find all the files which are modified 50 days back.# find / -mtime...3693 days ago
- ...earch command history if enabled by user. Use history command to display the history list with line numbers. Lines listed with with a * have been modified by user. Shell history searc...
3626 days ago
- +1 more Pages
Top-level pages
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) by anyone. Open source software is made by many people, and distributed under li...3769 days ago
List of In-silico Binding Site Prediction Tools
...y for understanding the function of the molecule in detail but also for structure-based design of possible ligands and potential drugs as well as modified protein molecules. While ther...3756 days ago
- +2 more Top-level pages
News
- ...he development of platform E. coli strain capable of producing gasoline for the first time. Furthermore, this platform strain, if desired, can be modified to produce other products suc...
3882 days ago
- ...d to the peptides. If one of these lines becomes visible, it means the target peptide is present in the sample. The technology can also easily be modified to detect multiple types of p...
3733 days ago
- +1 more News
Opportunity posts
JRF Position – International Institute of Information Technology, Hyderabad
...oject: Insight into the Structure–Function Relationships of Chemically Modified Nucleic Acids: A Molecular Dy...e project involves theoretical modelling and simulations on chemically modified nucleic acids to investigate...3188 days ago
Bio-Scripts
- #!/usr/local/bin/perl -w # Can be easily modified to run any command on every sequence in a folder # Directory of sequences $myDir = "/home/anjana/seqs"; # Output directory (re...
2928 days ago
- ..."; my $polyA = "AAAA"; #concatenate two strings my $modifiedDNA = $DNA.$polyA; #calculate the length of $modifiedDNA and #print out the value...s length $DNAlength\n"; #extract the second codon in $modifiedDNA my $codon = substr($modif...
2929 days ago
- +6 more Bio-Scripts
Groups
Genetic Modified (GM) Food/Organisms
...engineering is considered to be a genetically modified organism (GMO). The first GMO...a were commercialized in 1982 and genetically modified food has been sold since 1994...it. http://en.wikipedia.org/wiki/Genetically_modified_food http://en.wikipedia.org...3931 days ago
Tags
swgis v2.0 : a seqword genomic island sniffer
swgis v2.0 is the modified version of the seqword genomic island sniffer. this version is specifically optimized for predicting genomic islands in eukaryotic genomes. swgis v2.0 was tested on several eukaryotic species of different lineages. all identified genomic islands were deposited in t...Tags: swgis, modified, version, seqword, genomic, island, sniffer, HGT, rna, genome
2024 days ago
Comments
Comment on "Sibelia: A comparative genomics tool"
...blocks In this case Sibelia doesn't compute the synteny blocks and doesn't ouput them, but can output the graph. For example, to get only non-modified compressed de Bruijn grahp f...1297 days ago
Comment on "Most Commonly used Awk by Bioinformatician"
I love awk but recommend you to try bioawk . Bioawk is a modified version of awk which will parse some common sequence formats. https://github.com/lh3/bioawk3693 days ago
