Results for "motifs"
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...the following fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein sequences, predicting genes, finding regulatory motifs, analyzing gene expression, c...3953 days ago
Method in Comparative genomics !!
...t novel methods for the systematic de novo identification of regulatory motifs. The methods do not rely on p...otif discovery. Based on the genome-wide conservation patterns of known motifs, we developed three conservat...2742 days ago
- ...E Suite allows the biologist to discover novel motifs in collections of unaligned n...mentary strengths. It also allows discovery of motifs with arbitrary insertions and...es tools for scanning sequences for matches to motifs (FIMO, MAST and GLAM2Scan), s...
2698 days ago
Alien_Hunter : prediction of putative Horizontal Gene Transfer (HGT) events
...nter is an application for the prediction of putative Horizontal Gene Transfer (HGT) events with the implementation of Interpolated Variable Order Motifs (IVOMs). An IVOM approach ex...2317 days ago
MCAT: Motif Combining and Association Tool
This is a pipeline for finding motifs in fasta files.It can be run from the command line as follows: usage: orange_pipeline_refine.py [-h] [-w W] [--nmotifs NMOTIFS] [--iter ITER] [-c C]...1947 days ago
ShinyGO v0.61: Gene Ontology Enrichment Analysis + more
...rees and networks summarizing overlapping terms/pathways, protein-protein interaction networks, gene characterristics plots, and enriched promoter motifs.1440 days ago
ChIPBase: open database for studying the transcription factor binding sites and motifs
ChIPBase v2.0 is an open database for studying the transcription factor binding sites and motifs, and decoding the transcriptional regulatory networks of lncRNAs, miRNAs, other ncRNAs...866 days ago
