Results for "non coding RNA"
Top-level pages
...ost likely translation of all coding sequences in the EMBL databan...classification with 70S, 30S RNAs established the separate kin...comparisons of infectious and non–infectious organisms. T...2:185–219The Genome International Sequencing Consortium (...3962 days ago
Phylogenetic for Bioinformatics
Biologists estimate that there are about 5 to 100 million species of organisms living...nge through time.Every living organism contains DNA, RNA, a...orial University of Newfoundland Mr. Bayes NONA Oxford University Evolu...3961 days ago
- ...genomic information in both medical and non-medical settings and analysis...ed Markov models (IMMs) to identify the coding regions and distinguish them from noncoding DN Glimmer HMM A f...ubmissions that contain a single short mRNA sequence, and complex submiss...
3957 days ago
Useful Links for Bioinformaticians
Bioinformatics demands knowledge of various inter-linked su...y/riley.html www.tulane.edu/~biochem/nolan/lectures/rna/intro.htm http://lenti.med.u...from the beginning Central Dogma Glossary About RNA www.imsb.au.dk/~raybrown/...3146 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...h transcriptome assembly from RNA-Seq data without a reference gen...sembly pipeline from stranded RNA-Seq reads. Martin et al, BMC...onal pooling strategy with barcoding to allow use of Illumina s...y and genotyping in model and non-model species. Peterson et al...3795 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and s...en Source Initiative (OSI) is a global non-pr...functional genomics experiments, e.g. RNA-seq or ChIP-seq. GeneTalk h...lysis using a supra-hexagonal map Taverna workbench Tool for designing...3772 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...ct different isoforms and alternate splicing from RNA-Seq data htt...olsim/EvolveAGene A realistic coding sequence simulation program t...odon Coalescent simulation of coding DNA sequences with recombi...ltiple replica, differential, non-stranded RNA-Seq datasets. ht...3752 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS...owsers and file formats (such as GFF). See the Small RNA Profiling exercise for an exa...Ontology (GO) terms, find the nearest gene, exon, miRNA or custom features such as mo...3640 days ago
Commercial and public next-gen-seq (NGS) software
...ysis workflows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, Alle...st program to find semiglobal non-ga...ads against a range of Refseq RNA or NCBI genome builds for a n...ime to update this list. Alternate Base Calling Rolexa - R-bas...3534 days ago
- ...DBs and tools related with miRNA: miRNA Sequencing data analy.../tools.genxpro.net/omiras/ miRNApath( R based tool) : &nb...ld.de/rnahybrid/welcome.html RNA22 predictor : http://cbc...com/ssa_mirnas_db_home.php miRNA prediction on UTRs : htt...
3511 days ago
