Results for "nr"
Top-level pages
Bioinformatics Courses Around the World
...bsp;and (Universitat) Pompau Fabra , Spain Roderic Guigo, Enrique Blanco, Genis Parra, Serg...iology Network - Italian Node , Consiglio Nazionale delle Ricerche (CNR), Bari, ItalyDavid Judge, Jam...3951 days ago
Most Commonly used Awk by Bioinformatician
...awk '{print $2,$4,$5}' input.txt > output.txt awk 'BEGIN{OFS="\t"}{print $2,$4,$5}' input.txt show rows between 20th and 80th: awk 'NR>=20&&NR<=80' input.txt > output...3920 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ization tool is here Course materials for a short course entitled Introduction to R and Bioconductor, held in Seattle in Dec 2010 Genomic Regions Enrichment of Annotations Tool -...3787 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...s from allele data frequencies http://www.ensam.inra.fr/urlb/bottleneck/bottlenec...isease and quantitative trait models. Family or unrelated case-control data can b...ubstitution, insertion and deletion http://www.uhnresearch.ca/labs/tillier/softwa...3744 days ago
Next generation sequencing in R or bioconductor environment
...r detecting transcription factor (TF) binding sites in a large number of enriched regions from high-throug...rder to identify regions bound by transcription factors. PICS identifies enriched regions by modeling loca...3632 days ago
Commercial and public next-gen-seq (NGS) software
...regions of high coverage, which represent Chromatin Immunoprecipitation enrichment of sequence fragments,...the genome. The second pass filters out sites that are not significantly enriched compared to the normaliz...3526 days ago
- Pathway Analysis is usually performed with aim to enrich the genes with their functional information and r...DOSE,GOStat More: http://www.bioconductor.org/help/search/index.html?q=Enrichment+analysis+
3503 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad ( Institute of Bioresources and Sustainable Development (IBSD),...2578 days ago
Software packages for next gen sequence analysis
...regions of high coverage, which represent Chromatin Immunoprecipitation enrichment of sequence fragments,...the genome. The second pass filters out sites that are not significantly enriched compared to the normaliz...3250 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ns for RNA-Seq, Small RNA-Seq, WGS/WES, Pathway enrichment, Fusion detection and...elies on BWA and samtools; genotype calling for unrelated individuals and parent-...nsive variant analysis workflows”; “enriches raw NGS variants with do...2916 days ago
