2463 days ago
2364 days ago
Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and leave the course empowered to conduct in...ng from raw sequencing data. The course will focus on human genomics and human medic...2349 days ago
Foldit: Solve Puzzles for Science
Foldit is an online puzzle video game about protein folding. It is part of an experimental research project developed by the University of Washington, C...2327 days ago
snakepipes: A toolkit based on snakemake and python for analysis of NGS data
snakePipes are flexible and powerful workflows built using snakemake that simplify t...epipes) and documentation (https://snakepipes.readthedocs.io/en/latest/) are available onlin...1802 days ago
3d-dna: 3D de novo assembly (3D DNA) pipeline
This code is designed to enable anyone to reproduce the Hs2-HiC and the AaegL4 genomes reporte...n Figure S2. The assembly procedure is described in detail in the Supporting Onlin...2320 days ago
Circoletto: visualizing sequence similarity with Circos
Circoletto, an online visualization tool based on Circos, which provides a fast, aesthetically pleasing and informative overview of sequence similarity search results. Onlin...2277 days ago
Porechop: tool for finding and removing adapters from Oxford Nanopore reads
Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its m...2168 days ago
Gblocks: eliminates poorly aligned positions and divergent regions of a DNA or protein alignment
Gblocks eliminates poorly aligned positions and divergent regions of a DNA or protein ali...blocks selected from a protein alignment. Further information can be found in the onlin...2164 days ago
D-GENIES: A tool for Dotplot large Genomes in an Interactive, Efficient and Simple way
D-GENIES – for Dotplot large Genomes in an Interactive, Efficient and Simple way – is an onlin...2155 days ago