snakePipes are flexible and powerful workflows built using snakemake that simplify the analysis of NGS data.
(*Also available in "allele-specific" mode)
snakePipes can be installed via conda :
'conda install -c mpi-ie -c bioconda -c conda-forge snakePipes'.
Source code (https://github.com/maxplanck-ie/snakepipes) and documentation (https://snakepipes.readthedocs.io/en/latest/) are available online.
