GeneOverlap: An R package to test and visualize gene overlaps
Overlapping gene lists can reveal biological meanings and may lead to novel hypotheses. For example, histone modification is an important cellular mechanism that can pa...1969 days ago
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
...ical research and diagnostics. EXCAVATOR is freely available at http://sourceforge.net/projects/excavatortool/.EXCAVATOR is a novel software package for the detection of copy num...1961 days ago
Quick tour of Genetic Algorithms !
The R package GA provides a collection of general pur...ns for optimization using genetic algorithms. The package includes a flexible set of to...em at hand. https://cran.r-project.org/web/packages/GA/vignettes/GA.html1948 days ago
UpSetR: An R Package for the Visualization of Intersecting Sets and their Properties
...the UpSet website. You can also check out the UpSetR shiny app. Here is the source code for the shiny wrapper. A Python package called py-upset&nbs...1937 days ago
plumber:An R package that converts your existing R code to a web API
plumber allows you to create a REST API by merely decorating your existing R source code with special comments. Take a look at an example. # plumber.R #* Echo back...1893 days ago
DISTRUCT: a program for the graphical display of population structure
...-right printing order of populations, bottom-to-top printing order of clusers, colors, and other graphical details. [Example] [Download software package (includes the manual)] (you w...1881 days ago
OMTools: a software package for visualizing and processing optical mapping data
OMTools, an efficient and intuitive data processing and visualization suite to handle and explore large-scale optical mapping profiles. OMTools includes modules for vis...1877 days ago
Flye: Fast and accurate de novo assembler for single molecule sequencing reads
...Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipelin...1873 days ago
Flye: Fast and accurate de novo assembler for single molecule sequencing reads
...Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipelin...1778 days ago
The Extensive de novo TE Annotator (EDTA)
The EDTA package was designed to filter out false discoveries in raw TE candidates and generate a high-quality non-redundant TE library for whole-genome TE annotations. Sele...1745 days ago