How to install Perl modules on Mac OS X in easy steps !!
Today at work, I learned how to install Perl modules using CPAN. It’s a lot easier than I thought. You see, for the past couple of years, I’ve been a b...2753 days ago
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and shor...2701 days ago
Software and Tools to detect structure variation with long reads !!
Uncovering the connection between genetics and heritable diseases requires an approach that looks at all the variant bases and types in a genome. While a PacBio de...2606 days ago
String graph based genome assembly software and tools !
In graph theory, a string graph is an intersection graph of curves in the plane; each curve is called a "string". String graphs...2327 days ago
Installing Perl environment on Linux
By using plenv, you can easily install and switch among different version of Perl. This will be installed under your home directory in~/.plenv. Install latest Perl...2320 days ago
BBTools for bioinformatician !
BBMap.sh Mapping Nanopore reads BBMap.sh has a length cap of 6kbp. Reads longer than this will be broken into 6kbp pieces and mapped independently. Code: $ map...2269 days ago
Basic command-line to run BLAST
The goal of this tutorial is to run you through a demonstration of the command line, which you may not have seen or used much before. All of the commands below...2243 days ago
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