Results for "pattern"
Bio-Scripts
...es $myDir = "/home/anjana/seqs"; # Output directory (relative to $myDir or full path) $outputDir = "OutDir"; # Path to pattern file $patFile = "/home/anjana/patterns/polyA.pat"; # Go to seque...2931 days ago
A multilayer perceptron (MLP) neural network in Perl
...= 500; my $numHidden = 4; my $LR_IH = 0.7; my $LR_HO = 0.07; ################ Data dependent settings ######### my $numInputs = 3; my $numPatterns = 4; ####################...2931 days ago
- ...AAAAAAAAAAA”; $dna3 = “ATGAAAAAAAAAATGAAAAAAAAAAAATGAAAA”; $pattern = “ATG”; # match pattern to dna1 $m = $dna1 =~ m/$pat...attern found in dna2 : $m2 \n”; # find the position of the pattern match in dna1 $pos = index...
2924 days ago
Plot custom gene density with R
library(karyoploteR) pp2264 days ago
Perl script to find palindromic pattern !
#!/usr/bin/perl use strict; use warnings; use strict; my %invert; @invert{ qw[ A C G T ] } = qw[ T G C A ]; my $in = do{ local $/; }; chomp $in; print $in; for...2114 days ago
Installing pb-assembly on Linux !
...fc_fasta2fasta fc_ovlp_to_graph fc_rr_hctg_track.py fcaps fc_fetch_reads fc-pattern fc_run fc...2049 days ago
- ...elds. #NR: NR command keeps a current count of the number of input records. Remember that records are usually lines. Awk command performs the pattern/action statements once for ea...
909 days ago
