Results for "plant genome"
Blogs
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge...type of analysis that you are doing. This is particularly true in the case of genome assembly and annotation. At...3721 days ago
- In comparative genome analysis work, we usually compare more than two genomes and looks for syntenic regions amongst them. In my research...igned to provide a visual means for simultaneously comparing genomes of multiple amniote species....
3953 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologic...pped around on the respective genomes. Ovcharenko et. al. define i...e several conserved blocks in genome which remain conserved over h...f the two species) on several genomes. Figure: Image generated...irwise comparison of multiple genomes. The reconstructed synteny b...2623 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biol...tant biological research projects, such as the rice genome project [Yu, J. et al. Scienc...J. et al. PLoS Biol 3, e38 (2005)] and the silkworm genome project [Xia, Q. et al. Scien...3723 days ago
Dynamic chromosome breakpoints !!!
Cell division involves the distribution of identical genetic material, DNA, to two d...nets and contributed in development of new species. I will try to explain the genome hotspots/Evolutionary Breakpo...3566 days ago
Computer simulation of genetic mechanism !!
...erns and haplotype blocks for genome-wide interaction analysis htt...nnala.org/?page_id=241 GENOME A rapid coalescent-base...simulated genotypes http://evoplant.uni-hohenheim.de/doku.php?id=s...mulates realistic samples for genome-wide association studies. htt...2988 days ago
Tools and Method for Haplotype phasing !
Huge amounts of genotype data are being produc...ngly comprehensive and inexpensive genome-wide SNP microarrays and from ever more accessible whole-genome and whole-exome sequencing me...://linkage.rockefeller.edu/soft/gh/ The Genome Analysis Toolkit: http://www...1352 days ago
Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016
Live Webinar on RNA-Seq Data Analysis Abstract: Strand NGS supports an extensive wo...lysis and visualization of RNA-Seq data. The workflow includes Transcriptome / Genome alignment, Differential expre...2768 days ago
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed...inversions and translocations litter genomes and are often associated wit..., SVs arguably have a large impact on genome evolution and should not be n...a critical role in the evolution of a genome as they act as ‘spare p...2716 days ago
Important Journals, Blogs and Forums for Bioinformaticians
Journals. Most journals have RSS feeds...and advance online publications Genome Research - current & advance Genome Biology - editors picks, late...cs Briefings in Bioinformatics Genome Biology Genome Research: cur...eds from >350 blogs about R) Genomes Unzipped Jason Moore's Epis...2656 days ago
