Results for "polishing"
Bookmarks
ONT assembly and Illumina polishing pipeline
This pipeline performs the following steps: Assembly of nanopore reads using Canu. Polish canu contigs using racon (optional). Map a paired-end Illum...2349 days ago
Minipolish: A tool for Racon polishing of miniasm assemblies
...nd very fast. However, it does not include a polishing step, so its assemblies have...pieces of long reads. Racon is a great polishing tool that can be used to clea...o takes care of some of the other nuances of polishing a miniasm assembly: Adding...1609 days ago
pbmm2:A minimap2 frontend for PacBio native data formats
...t, provide sets of recommended parameters, generate sorted output on-the-fly, and postprocess alignments. Sorted output can be used directly for polishing using GenomicConsensus, if BA...1532 days ago
Apollo: A Sequencing-Technology-Independent, Scalable, and Accurate Assembly Polishing Algorithm
Apollo is an assembly polishing algorithm that attempts to correct the errors in an assembly. It can take multiple set of reads in a single run and polish the assemblies of genomes...1505 days ago
Merfin: improved variant filtering, assembly evaluation and polishing via k-mer validation
Merfin, a k-mer based variant-filtering algorithm for improved accuracy in genotyping and genome assembly polishing. Merfin evaluates each variant based on the expected k-mer...757 days ago
