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2861 days ago
FSA: Fast Statistical Alignment
...le by the sequence annealing technique for constructing a multiple alignment from pairwise comparisons, developed by Ariel Schwartz in "Posterior Decoding Methods for Optimization and...2639 days ago
Awesome perl frameworks, libraries and software - PART 2
licheng/gccfilter - gccfilter is a perl filter to colorize and simplify (or expa...for Molecular Hacking daoswald/JSON-Tiny - Perl module for encoding and decoding JSON in a minimalistic way, b...2488 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools including alignment, RNA-Se...th individual-based prior p(genotype) to generate posterior probabilities Input: GLF Ou...no acid substitution on protein; Calculates Bayes posterio...2903 days ago
China’s BGI says it can sequence a genome for just $100
Using technology originally acquired in the US, the Chinese gene giant BGI Group says i...quo;extreme” DNA sequencing system it plans to offer that is capable of decoding the genomes of 100,000 people...1521 days ago
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2069 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far the development of reliable knowledge –based potentials that can be used for automatic prediction of trans-membrane (TM) protein structure. While algorithm ...Tags: transmembrane, protein, hidden markov model, viterbi, posterior decoding, classifier, Matlab, Machine Learning, Decoder, Discriminant analysis
3938 days ago