P_RNA_scaffolder: a fast and accurate genome scaffolder using paired-end RNA-sequencing reads
...o scaffold genomes. This tool aims to improve the completeness of both protein-coding and non-coding genes....tool was applied to scaffolding human contigs, the structures of both protein-coding genes and circular RNA...2148 days ago
2167 days ago
P_RNA_scaffolder: a fast and accurate genome scaffolder using paired-end RNA-sequencing reads
...nd RNA-sequencing reads from target speciesies. Our method provides another practical alternative to existing mate-pair_based approaches or other Protein-based approaches (for instanc...2061 days ago
STRUM: structure-based prediction of protein stability changes upon single-point mutation
...he fold stability change (ΔΔG) of protein molecules upon single-point n...les with low-resolution structure models from protein structure prediction, which h...the method and make it applicable to various protein seqences, including those wit...2057 days ago
GenomeThreader: Gene Prediction Software
...pute gene structure predictions. The gene structure predictions are calculated using a similarity-based approach where additional cDNA/EST and/or protein sequences are used to predict...2034 days ago
FRODOCK 2.0: fast protein–protein docking server
frodock: a user-friendly protein–protein docking server based on an improved version...a very effective tool to explore and select protein–protein models and inte...d allow the retrieval of reliable potential protein–protein binding conform...2021 days ago
KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment
KOBAS 3.0 is a web server for gene/protein functional annotation (Annotate module) and functional gene set enrichment(Enrichment module). For Annotate module, it accepts gene lis...2019 days ago
2013 days ago
Ancestral Genomes: a resource for reconstructed ancestral genes and genomes across the tree of life
...enomes (http://ancestralgenomes.org) is a resource for comprehensive reconstructions of these ‘fossil genomes’. Comprehensive sets of protein-coding genes have been recons...2005 days ago
2002 days ago