Complex networks and network mining: developing graph theoretic, mathematical, and computational algorithms for e...opology and biological function, disease, and evolution in molecular (e.g., protein-protein...
Computer Aided Protein Structure Prediction; Identification of Vaccine
Candidates (T-Epitope prediction); Analysis of Nucleotide/Protein Sequences; Development of Web...arison of force field simulations. Analysis of DNA-protein...
Scientific Interests:
Models and software for predicting who is at risk of carryin...sian meta-analysis; Bayesian causal inference; decision analysis.
Bayesian modeling and computation: multilevel m...
This group interested in modeling genome dynamics in following topics:
---how genetic variation is distributed within and between individuals,
---determining how this diversity...
In a lot of my work in bioinformatics, I have been using hidden Markov models (HMMs). As...(refs). Since then I have applied HMMs to membrane proteins (refs) and gene identificati...s and structure prediction are the main areas; and protein...
Efflux pumps (RND family)
Functioning of efflux systems in Gram-negative bacteria
Determinants of the compoun...ions between antimicrobial peptides in the presence of different membranes
Protein-protein...
Mike Ritchie Lab primary research focus is the detection of susceptibility genes for common diseases such as cancer...gene-gene interactions associated with human disease.
Gene expression and protein...
Broad area of research:
Genome Annotation and Functional Genomics
Bergman Lab is actively engaged in the deve...in genome sequences. Bergman Lab work focuses on improving annotation of non-protein-...
The Laboratoire de Bioinformatique des Génomes et des Réseaux (Genome and Network Bioinformatics) is specialized in...c pathfinding, see also metabolic pathfinding in NeAT)
Critical assesment of protein...