Results for "psiblast"
Blogs
...sp;the client and run the program without any arguments. Language Download Requirements Perl psiblast.pl LWP and XML::Simple Python psiblast.py xmltramp2 For...956 days ago
Bookmarks
BLAST options, setting and defaults
...ee the NCBI BLAST Course. Additional information can be found in the BLAST 2.0 Release Notes BLASTNBLASTPBLASTXTBLASTNTBLASTXPSIBLAST Gap opening penalty:cost t...1985 days ago
Top-level pages
- ...tructure prediction methods (secondary structure prediction). Sequence profile searches have become readily available through the introduction of PsiBLAST [3]; studying evolutionary a...
3959 days ago
Bio-Scripts
Command line to create blast uniref database !
#The NCBI BLAST+ distribution does not include 'blastpgp', it has been replaced by the 'psiblast' program. The 'blastpgp' program is available in the legacy NCBI BLAST package (no long...962 days ago
Tags
MMseqs2: ultra fast and sensitive sequence search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multi...Tags: MMseqs2, ultra, fast, sensitive, sequence, search, clustering, suite, psiblast
954 days ago
