BOL

Results for "pubmed"

Bookmarks

• • Jitendra Narayan@admin

  

  Next Generation Sequencing (NGS) Tutorials

  ...iscovery and genotyping using next-generation DNA sequencing data  PubMed: 21478889 SNiPlay: a web-bas...is of next-generation sequencing data. http://www.ncbi.nlm.nih.gov/pubmed/23657089 GATK: a Toolkit for...

  3504 days ago

• • Jitendra Narayan@admin

  

  ShRec3D

  ...3D structure (b) from the sole knowledge of the contacts between different genomic regions (a) as determined by Hi-C (http://www.ncbi.nlm.nih.gov/pubmed/19815776). There are two opt...

  3435 days ago

• • Manisha Mishra@manisha

  

  MetaPred2CS

  MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein interaction pr...

  2637 days ago

• • Jit@jit.aber

  

  Centurion

  ...r centromere identification for a large number of yeast species, even with a limited amount of Hi-C sequencing. Paper:http://www.ncbi.nlm.nih.gov/pubmed/25940625 More at http://cbio...

  3022 days ago

• • Priya Singh@priyasingh

  

  RACA: Reference-Assisted Chromosome Assembly

  ...ed by NGS and assemblers into longer chromosomal fragments using comparative genome information and paired-end reads. http://www.ncbi.nlm.nih.gov/pubmed/23307812 http://bioen-compbi...

  2967 days ago

• • Neelam Jha@neelam

  

  ALE: a Generic Assembly Likelihood Evaluation Framework for Assessing the Accuracy of Genome and Metagenome Assemblies

  ...nome assembly accuracy, which can be used to identify misassemblies or to optimize the assembly process. More at http://www.ncbi.nlm.nih.gov/pubmed/23303509

  2948 days ago

• • Jit@jit.aber

  

  Platanus

  Platanus is a novel de novo sequence assembler that can reconstruct genomic sequences of highly heterozygous diploids from massively parallel shotgun sequencing data....

  2931 days ago

• • Jit@jit.aber

  

  CovCal: Coverage / Read Count Calculator

  Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configura...

  2182 days ago

• • Poonam Mahapatra@poonam

  

  Ka, Ks and Ka/Ks calculations

  ...ed.  Look for KaKs calculation: https://github.com/fumba/kaks-calculator http://longlab.uchicago.edu/?q=gKaKs http://www.ncbi.nlm.nih.gov/pubmed/23314322

  2822 days ago

• • Jit@jit.aber

  

  BRAKER: pipeline for fully automated prediction of protein coding genes with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes

  ...gths of GeneMark-ET and AUGUSTUS provided motivation for designing a new combined tool for automatic gene prediction. http://www.ncbi.nlm.nih.gov/pubmed/26559507

  1967 days ago

• « Previous
• 1
• 2
• 3
• 4
• Next »