How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser y...e sensitivity, make and make test.# perl Makefile.PLChecking if your kit is complete......ll "Bundle::BioPerl"In the example above, CPAN will check for Bundle::BioPerl depe...3963 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge am...aving maximum chances of getting errors, so please be careful and always cross check your data before coming to an...3720 days ago
List of bioinformatics companies and genomics service providers
Plz check out link for bioinformatics and genomics companies.3699 days ago
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Bioinformatics approach to Boar Taint
Meat products obtained from intact male pigs often produce offensive smell or odour whic...on to remove boar taint but it also results in bad quality of meat due to low level of s...prepared after filtering SNPs on the basis of SNP quali...3802 days ago
3841 days ago
Linux SSH Client Commands for Bioinformatics
Here come on let play with the following basic command line usage of the ssh client.1. Check your SSH Client Version:Checking for your SSH client is ver...s a typical unix background job, which you can check as shown below: &n...3719 days ago
Check the Size of a directory & Free disk space.
The amount of databases we bioinforma...such cases, we always need to check our server for free spaces et...r machine (df). 'du' – Check the size of a directory $ du...u -ahIf you are interested in checking everything present in a fo...his is not the only option to check the sizes and free spaces but...3715 days ago
3960 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics in plants. Jiménez-...Central Improving SNP discovery by base alignment quality. Li H, Bioinformatics 27(8):1...ormatics 26:841-842, 2010. Publisher Website Data quali...3792 days ago
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Illumina reveals first dataset of long reads
...ge read length is around 8,500 base pairs in release dataset. Best thing about this, there is not much effect on cost and quality of data. You can also check following pages for publicati...3921 days ago
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4 positions in high throughput computational metagenomics and systems biology of natural products
The Research and Innovation Centre at the Fondazione Edmund Mach (CRI-FEM) is a major international research institution with strong and expanding research interests in Fruit Genomics, Quali...3924 days ago
National Center for Bioinformatics (NCB)
NCB is offering M.Phil and Ph.D programs in the area of Bioinformatics. The major goal of NCB is to promote quali...3587 days ago
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Chemical Elements of Bioinformatics
You must be familiar with periodic table and colour pattern, but this time you are going to amaze by new elements table by Eagle genomics. Just check it out and have fun :) http://elements.eaglegenomics.com/3887 days ago
Computer Theory & Genetics: George Chao at TEDxUMNSalon
George Chao is an undergraduate senior studying Genetics and Computer Science at the U...ve in the power of ideas to change attitudes, lives and ultimately the world. Check out TEDxUMN at http://www.TED...3928 days ago
RNA interference (RNAi): by Nature Video
RNA interference (RNAi) is an important process, used by many different organisms to r...'d like to know more about the structures and processes you see in this video, check out the accompanying slidesho...3906 days ago
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Count the frequency of base G in a given DNA sequence
#!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #initialize...gth of $DNA my $DNAlength = length($DNA); #for each letter in the sequence check if it is the base G #if 'yes...2930 days ago
Which Bioinformatics Journals Do You Follow?
Which are your favorite bioinformatics journals? The ones that you check every month or so, or that you are subscribed to?3326 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...d. [1e0] -c, --mapq INT Threshold for mapping quality. If mapq < INT, read will...score will be counted for ambiguity (mapping quality). Value of 0.0 counts only id...with values above FLT * max_bin is processed, check if there is one extremely dom...2305 days ago