Genome sequencing projects have enormous potential for benefiting human endeavors. However, just as acquiring a language's vocabulary does not enable one to speak it, da...
Broad Area of Research: RNA biology (microRNA, lncRNA), Stem cells, Functional genomics,...n, stem cell pluripotency etc. Current research activities of our lab include analysis of expression pattern of ncRN...
Complex networks and network mining: developing graph theoretic, mathematical, and computational algorithms for efficient extraction of function from topology of complex...
The Huber group develops computational and statistical metho...nteractions by automated phenotyping, using image analysis, machine learning, sparse mod..., genomes as biomarkers, cancer phylogeny.
Image analysis for systems biology: measurin...
Computer Aided Protein Structure Prediction; Identification of Vaccine
Candidates (T-Epitope prediction); Analysis of Nucleotide/Protein Sequenc...rest ::
Comparison of force field simulations. Analysis of DNA-protein interactions u...
Scientific Interests:
Models and software for pred...kin cancer.
Statistical methods for the analysis of high throughput genomic data: analysis of cancer genome sequencing p...of chronic disease outcomes; Bayesian meta-analysis; Bayesian causal inference; d...
This group interested in modeling genome dynamics in following topics:
---how genetic variation is distributed within and between individuals,
---determining how th...
In a lot of my work in bioinformatics, I have been using hidden Markov models (HMMs). As...).
Now my main interests are in gene regulation, where we work on promoter analysis; non-coding RNA, where miRNAs...
Broad area of research:
Genome Annotation and Functional Genomics
Bergman Lab is a...yeast genomes, (ii) annotation of CRMs and TFBSs in the fly genome, and (iii) analysis of transposon knockout collec...
The Shendure Lab is part of the Department of Genome Sciences at the University of Washi...cs; 2) genome contiguity & completeness; 3) massively parallel functional analysis; 4) molecular tagging; 5) syn...