2980 days ago
2765 days ago
1964 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
...ation. Such analyses are often based on whole-genome alignments to elucidate structural differences arising from insertions, deletions or from rearrangement events. Computational tools t...2657 days ago
MGRA: Breakpoint graphs and ancestral genome reconstructions
MGRA (Multiple Genome Rearrangements and Ancestors) is a tool for reconstructio...sertion and deletions in addition to genome rearrangements and allows the input genomes...st plausible phylogenetic tree based on the rearrangement characters.2469 days ago
2351 days ago
SVfinder: Tool for detecting genomic rearrangement form DNA-seq data
SVfinder provides genome-wide detection of structural variants from next generation paired-end sequencing reads.2326 days ago
2290 days ago
Reference-free prediction of rearrangement breakpoint reads
lideSort-BPR ( b reak p oint r eads) is based on a fast algorithm for all-against-all comparisons of short reads and theoretical analyses of...2243 days ago
2039 days ago