Results for "research n practicle work"
Bio-Scripts
Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda insta...-blast-2.7.1+-win64.exe with your web browser. #If that FTP links does not work, try HTTP instead http://ftp....1161 days ago
- #!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #transcribe DN...$rcDNA =~ s/C/G/g; print "Reverse complement of $DNA is $rcDNA\n"; #did it work? #find the reverse complem...
2931 days ago
- #!/usr/local/bin/perl -w # NOTE: YOU MUST CHANGE THE LINE AB...print STDERR "If $0\n"; print STDERR "does not work correctly you will\n"; p...print STDERR "If $0\n"; print STDERR "does not work correctly you will\n"; p...
2707 days ago
Create genome scaffolding with Perl
#!/usr/bin/perl use warnings; use strict; use English;...=~ tr/ACGTUYRSWMKDVHBXN-/TGCAARYSWKMHBDVXN-/; # work on masked sequences as well...inue on if there's a good likelihood that this will work ## i.e. trimLength * (1-...2322 days ago
Install Python locally on shared Linux server !
#Install python to local directory #Firstly, I create a folder in my home directory, do...make && make install #Notice the prefix option, it is mandatory for this to work. The value of prefix option i...2112 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget http...ge template for Spark tools (will NOT work on non-Spark tools) gatk...(BETA Tool) SortSam on Spark (works on SAM/BAM/CRAM) SplitN...ns the structural variation discovery workflow on a single sample S...
2089 days ago
Installing pb-assembly on Linux !
[jnarayan@hmem00 ~]$ module avail ------------------------------...Octave/4.2.1-foss-2016a fireworks/python-2.7.3...y ISO compliant, intended for Research Use Only and not for use...y ISO compliant, intended for Research Use Only and not for use...2048 days ago
Setting up falconUnzip conda environments for genome assembly !
➜ Analysis_Results conda create -n denovo_asm Solving environment: done...d8_1 conda-forge networkx: 2.2-py_1...essarily ISO compliant, intended for Research...essarily ISO compliant, intended for Research Use Only and not for use...2004 days ago
Perl script to delete the adjacent repeats !
/usr/bin/perl #Mostly the interview question for bioinfomatician ! #Write a code to...ou wanted to trim any number of duplicates down to a single letter, this would work: $string =~ s/(.)\1+/$1/gi1564 days ago
- (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 --...
1456 days ago
