Results for "ribosomal"
Blogs
...ic information, including 16S rRNA sequences. You can access the 16S ribosomal RNA sequences from NCBI's Nuc...LVA (https://www.arb-silva.de/) is another comprehensive database for ribosomal RNA (rRNA) sequences. It cov...23 days ago
Bookmarks
Barrnap: Bacterial ribosomal RNA predictor
Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S)....2562 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...es the 3' end of every gene in the experimentally verified Ecogene data set (except those containing introns). It possesses a very sophisticated ribosomal binding site scoring system t...2696 days ago
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Top-level pages
Genome Assembly Tools and Software - PART1 !!
...ow cell technologies (MinION). REAGO 1.1 – REconstruct 16S ribosomal RNA Genes from MetagenOmic data an assembly tool for 16S ribosomal RNA recovery from metagenomic...2698 days ago
News
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
MCBI have a curated set of ribosomal RNA (rRNA) reference sequences (targeted loci...bsp; *16S ribosomal RNA (Bacteria and Archaea) &...bsp; *18S ribosomal RNA sequences (SSU) from Fung...1545 days ago
Opportunity posts
Bioinformatics postdoctoral position at inStem
...o analyse and integrate high throughput data from various aspects of translation regulation including non-coding RNAs, mRNAs and modification of ribosomal RNA. We request the intereste...2285 days ago
Bio-Scripts
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...Install silvaDB #https://www.arb-silva.de/no_cache/download/archive/release_138_1/Exports/ #LSU: Large subunit (23S/28S ribosomal RNAs) #SSU: Small subunit (16S/18S ribosomal RNAs) my $silva_url_LSU =...1172 days ago
Tags
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
MCBI have a curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism sources and current names. This set is critical for correctly identifying and classifying prokaryotic (bacteria and archaea) and fungal samples. To provide easy access to these sequences, ...Tags: Curated, ribosomal, RNA, rRNA, reference, sequences, targeted, loci, verifiable, organism, 16S, 18S, 28S, ribosomal, RNA
1545 days ago
