Results for "sensitivity"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...d XML-Parser-2.36.tar.gz# tar xvf XML-Parser-2.36.tar# cd XML-Parser-2.36Build the perl module: Build by running Makefile.PL, remember the case sensitivity, make and make test.# perl Ma...3965 days ago
- ...e entire gene, which by conventional sequencing is time consuming and expensive. Next Generation Sequencing (NGS) based approaches increase the sensitivity of mutation detection, making...
2818 days ago
- +6 more Blogs
Bookmarks
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
...ing long, error-prone third-generation sequencing data.It is designed to handle Oxford Nanopore MinION 1d and 2d reads with very high sensitivity and accuracy, and also presen...3239 days ago
- ...specialized tool sets for various analyses. It also features three sequence alignment packages: Satsuma, a highly parallelized program for high-sensitivity, genome-wide synteny; Papaya,...
3023 days ago
- +18 more Bookmarks
Pages
Genome Assembly Tools and Software - PART2 !!
...ted reads mapping. There is no limitaions on read widths or number of mismatches. RMAP can now map more than 8 million reads in an hour at full sensitivity to 2 mismatches MIRA 4.0.2 &...2700 days ago
Top-level pages
Commercial and public next-gen-seq (NGS) software
...ects. Requires Linux or Mac OS X. PASS - It supports Illumina, SOLiD and Roche-FLX data formats and allows the user to modulate very finely the sensitivity of the alignments. Spaced see...3534 days ago
Software packages for next gen sequence analysis
...ts. Requires Linux or Mac OS X. * PASS - It supports Illumina, SOLiD and Roche-FLX data formats and allows the user to modulate very finely the sensitivity of the alignments. Spaced see...3257 days ago
- +4 more Top-level pages
Bio-Scripts
Script to rapid genome clustering based on pairwise ANI
...fmt '6 std qlen slen' -max_target_seqs 10000 -o -num_threads 32 Note: using the -perc_identity flag will speed up the search at the cost of sensitivity: blastn -query -db -outfmt...650 days ago
Comments
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...ied in megabytes. Value <= 0 loads the entire file. [1024] General-purpose pre-set options: -x, --preset STR Pre-set parameters to increase sensitivity for different sequencing tech...2307 days ago
