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Results for "sequence analysis"

Wire posts

  • Rahul Nayak

    Genomic data analysis http://www.bicnirrh.res.in/workshop.php #Genome #Data #Analysis #NGS #NIRRH #Mumbai

    3142 days ago

  • Rahul Nayak

    #Scaffolder #evaluation with #Python #scripts https://github.com/martinghunt/Scaffolder-evaluation/tree/master/Analysis-scripts

    3020 days ago

  • Neelam Jha

    A powerful #multiple #sequence #alignment #browser http://wasabiapp.org/

    2977 days ago

  • Archana Malhotra

    Dynamic programming http://www.avatar.se/molbioinfo2001/dynprog/dynamic.html #Programming #Alignment #Sequence #Dynamic

    2967 days ago

  • Neelam Jha

    PAired-eND Assembler for DNA sequences https://github.com/neufeld/pandaseq #Sequence #Assembler #PANDAseq

    2962 days ago

  • Jit

    Some beautiful script for analysis in #R http://userweb.eng.gla.ac.uk/umer.ijaz/bioinformatics/ecological.html

    2905 days ago

  • Poonam Mahapatra

    #Hierarchical cluster analysis http://www.econ.upf.edu/~michael/stanford/maeb7.pdf

    2864 days ago

  • Abhimanyu Singh

    Leading edge analysis reports #Tags to indicate the percentage of #genes contributing to the #enrichment score, http://www.r-bloggers.com/leading-edge-analysis/ #R

    2856 days ago

  • Radha Agarkar

    Extract fasta sequence by Ids: perl -ne 'if(/^>(\S+)/){$c=grep{/^$1$/}qw(id1 id2)}print if $c' fasta.file #Perl #PerlOneliner #PerlTrick #Extract #Ids #Fasta

    2799 days ago

  • Radha Agarkar

    Extract sequence by using Ids file (assuming one ids in a line): perl -ne 'if(/^>(\S+)/){$c=$i{$1}}$c?print:chomp;$i{$_}=1 if @ARGV' ids.file fasta.file #PerlTricks #PerlOneliner #Perl #Extract #Ids #

    2799 days ago

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