Results for "sequence analysis"
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Comment on "Tools for Sequence translation !"
Sequence translation is the process of converting a DNA or RNA sequence into its corresponding protein sequence. This is an important step in the analysis of genomic and transcriptomic...the many tools available for sequence translation. The choice of to...415 days ago
Comment on "Tools for RNA classification"
...eful for identifying non-coding RNA (ncRNA) sequences. Rfam: Rfam is a databa...tor machine (SVM) algorithm to classify RNA sequences. It is particularly useful f...a combination of HMM-based and comparative sequence analysis approaches to predict tRNA ge...415 days ago
Comment on "Sibelia: A comparative genomics tool"
...arameters set can be used for analysis of distantly-related genomes....diagram is more suitable for analysis. Please note that sequences that do not contain any syn...ng: 1. Seq_id -- ID of the sequence, that the instance belongs to...ur exactly once in each input sequence. This option assumes that al...1279 days ago
- ...tools for quality control and analysis of high-throughput sequence data. HTSeq HTSeq.The P...NGSQC: cross-platform quality analysis pipeline for deep sequencing...control before computational analysis. Essentially, provides three...pects of RNA-Seq experiments: sequence quality, sequencing depth, st...
2132 days ago
Comment on "Virtual Bioinformatics Online Tutorial"
...Seminar Series Training Courses by the Babraham Institute the Bioinformatics group JCBioinformatics Bioinformatics Crash Course Next-Gen Sequence Analysis Workshop (2013) R and NGS tu...2315 days ago
Comment on "Method in Comparative genomics !!"
A PhD thesis on comparative genomics "METHODS FOR HIGH-THROUGHPUT COMPARATIVE GENOMICS AND DISTRIBUTED SEQUENCE ANALYSIS" @ http://drum.lib.umd.edu/bitstream/handle/1903/11669/Angiuoli_umd_0117E_12062.pdf;jsessionid=A30813F9A1A23A54D917BC34109FE38D?sequence=12722 days ago
Comment on "Five points for bioinformatics software/tools"
This paper "Buying in to bioinformatics: an introduction to commercial sequence analysis software" provide an in-depth overview. Link @ http://bib.oxfordjournals.org/content/early/2014/09/01/bib.bbu030.abstract.html?3510 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
Challenges and Solutions in the Analysis of Next Generation Sequence Data http://lh3lh3.users.sourceforge.net/download/sam-20100630.pdf3579 days ago
Comment on "List of popular bioinformatics software/tools"
There are different ways to perform exome sequence analysis, but GATK have a good guide for 'Best Practice': http://www.broadinstitute.org/gatk/guide/best-practices3582 days ago
Comment on "Latest paper on comparison of mapping tools"
...ologies has led to an exponential growth of sequence data. To tackle this ‘d...ey National Laboratory introduce the BioPig sequence analysis toolkit as one of the solutio...doop-based analytic toolkit for large-scale sequence data http://bioinformatics.ox...3803 days ago
