Results for "set"
Bookmarks
Public Databases for Bioinformatics !
...NISHED" For use case 1 we obtained the following ENCODE and ROADMAP datasets https://www.encodeproje...ucsc.edu/goldenPath/hg38/bigZips/hg38.fa.gz. For use case 2 we used the set of narrowPeak files summarize...1146 days ago
- ...erential gene expression (DGE) analysis using a very small synthetic dataset from a well studied organism....ting small variants (SNVs and indels) in human genomic DNA using a small set of reads from chromosome 22....
3660 days ago
- ...lution of chromosome number proceeds. For each model, the program estimates the rates for the possible transitions assumed by the model, infers the set of ancestral chromosome numbe...
3395 days ago
DEG 5.0: a database of essential genes in both prokaryotes and eukaryotes
...e indispensable for the survival of an organism, and their functions are therefore considered a foundation of life. Determination of a minimal gene set needed to sustain a life form...1139 days ago
DEG 5.0: a database of essential genes in both prokaryotes and eukaryotes
...e indispensable for the survival of an organism, and their functions are therefore considered a foundation of life. Determination of a minimal gene set needed to sustain a life form...1139 days ago
Bioinformatics Made Easy Search: Bioinformatics tools and run genomic analysis in the cloud
.... With InsideDNA, you can upload and store your own genomic/genetic datasets in a limitless cloud space,...ze it with a powerful compute instance, without any tool installation or set up hassle. More at https://i...3188 days ago
UCSC Genome Browser and Blat software !
...enome Browser and Blat application binaries built for standalone command-line use on various supported Linux and UNIX platforms. To determine which set of binaries to download, type...3006 days ago
- ...ng GBrowse as a server. This tutorial assumes that you have successfully set up Perl, GD, BioPerl and the...se database (no relational database required!) Later we will show how to set up a genome size database usi...
3005 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set that facilitates comprehensive and reproducible analysis of chordate genome data. Ensembl computes pairwise a...2996 days ago
RNA-Seq De novo Assembly Using Trinity
...uster represents the full transcriptonal complexity for a given gene (or sets of genes that share sequences in common). Chrysalis then partitions the full read set among these disjoint graphs....2972 days ago
