Results for "simulating"
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Reads simulator Wgsim is a small tool for simulating sequence reads from a reference genome. It is able to si...nerate INDEL sequencing errors, but this can be partly compensated by simulating INDEL polymorphisms.Wgsim out...2883 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
...al matrix describing migration only among the connected sub-populations. This offers a substantial gain in computing time and system memory when simulating very large grids. Input...2783 days ago
simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data
simNGS is software for simulating observations from Illumina sequencing machines using the statistical models behind the AYB base-calling software. By default, observations only inc...2360 days ago
Seal: SEquence ALignment evaluation suite
...ernatively, generating an artificial reference genome based on input parameters (length, repeat count, repeat length, repeat variability rate). Simulating reads from random locations i...2324 days ago
RestrictionDigest: A powerful Perl module for simulating genomic restriction digests
RestrictionDigest can simulate the reference genome digestion and generate comprehensive information of the simulation. It can simulate single-enzyme digestion, double-en...2164 days ago
simuG: a general-purpose genome simulator
...random genomic variants can be very useful for benchmarking genomic and bioinformatics analyses. Here we introduce simuG, a lightweight tool for simulating the full-spectrum of genomic...1630 days ago
