Results for "single cell"
Bio-Scripts
#!/usr/bin/env perl # Usage: fastaRead.pl data.fa use strict; use warnings; my $filename = $ARGV[0]; my $sequence; open my $fileH, "2921 days ago
Needleman-Wunsch Algorithm in Perl
#!/usr/bin/perl # USAGE: perl nw.pl HEAGAWGHEE PAWHEAE BLOSUM50.txt -8 # See: "Biological sequence anaysis" Durbin et al. ed. CUP 1998, Pg. 19 # Needleman...2913 days ago
- #USAGE: CI_normal(matrix[,c(x:y)],97.5) - multiple column from a normal distribution #U...distribution #USAGE: CI_normal(matrix[,x],97.5) - single column from a normal distribution #USAGE: CI_tdist(matrix[,x],97.5) - sing...
2879 days ago
- ➜ trinityrnaseq-Trinity-v2.6.6 git:(master) ✗ ./Trinity --seqType fq --max_memory 250G --left /media/urbe/MyPasspor...mpleted successfully. :-) ** Harvesting all assembled transcripts into a sing...
2134 days ago
- ➜ bin git:(master) ✗ ./fastq-dump --help Usage: ./fastq-dump [options] [...]...filename(s) and deflines (only for single...me joined into sing...
2133 days ago
- ...tions MUST be passed inside a single string with space-separated v...Calling Metrics files into a single file AnalyzeCovariates...(BETA Tool) Emit a single sample name MeanQualityB...Miscellaneous tools, e.g. those that ai...
2082 days ago
Installing pb-assembly on Linux !
[jnarayan@hmem00 ~]$ module avail -------------------------------------------------------- /usr/share/Modules/mo...R/3.2.3-goolf-1.4.10 gromacs/sing...2041 days ago
- #http://www.nupack.org/downloads/source ➜ tools git:(master) ✗ cd nupack3.0...etEnergy.c:304:7: warning: variable ‘leftSingle’ set but not used [-Wunused-but-set-variable] int leftSingle; ^~~~~~~~~~ cc -std=...sign/design_pfunc_utils' make -C design/sing...
2033 days ago
Perl script to delete the adjacent repeats !
/usr/bin/perl #Mostly the interview question for bioinfomatician ! #Write a code to delete the adjacent repeate...1/$1/gi #And finally, if you wanted to trim any number of duplicates down to a sing...1558 days ago
Exit Bash Script When Any Command Fails
This can actually be done with a single line using the set builtin command with the -e option. #1--------------------------------------------------------------------...1527 days ago
