Results for "species"
Top-level pages
Phylogenetic for Bioinformatics
Biologists estimate that there are about 5 to 100 million species of organisms living on Earth today. Eviden...olutionary relatedness among various groups of organisms (for example, species or populations), which is dis...3958 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ust, simple genotyping-by-sequencing (GBS) approach for high diversity species. Elshire et al., PLoS One 6(5...method for de novo SNP discovery and genotyping in model and non-model species. Peterson et al, PLoS One 7(5...3791 days ago
List of In-silico Binding Site Prediction Tools
...proteins such as Kinases and the conserved structural features of their immediate environments either within the same specie or across different species. For example, it can highligh...3756 days ago
Apps for Busy Bioinformatics Researchers !!!
...er databases to retrieve up-to-date annotation information for over 30 species, based on gene symbol search....her databases to retrieve up-to-date annotation information for over 30species, based on gene symbol search....3553 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...se mutations; links to dbSNP 132, GRCh37; Standalone or web app program; Very popular Input: Uniprot ID or Accession, Go term ID, Function name, Species Name or ID, etc Output:...2920 days ago
Genome Assembly Tools and Software - PART1 !!
...54 EST sequences against high quality reference sequences from related species. MetaCAA – Assembl...r scaffolding diploid genomes. HaploClique 0.1 – Viral Quasispecies Assembly from Paired-end data...2697 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...ent ancestors. ancestor -- Any organism, population, or species from which some other organism, population, or species is descended by reproduction....evel of inclusiveness. Thus a genus contains one or more species, a family includes one or mor...2474 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...ing afcluster Clustering of reads from different genes and different species based on k-mer counts S...C) https://sourceforge.net/projects/ksnp/files/ NGS-MC Phylogeny of species based on NGS reads using alig...2383 days ago
Single Cell RNAseq data analysis tutorial !!
...r each gene across a large population of input cells Useful for comparative transcriptomics, e.g. samples of the same tissue from different species Useful for quantifying expre...2362 days ago
List of visualization tools for network biology
...makes it possible to infer details about the network as a whole at the species and/or population level. ...a NetworkBLAST Analysis of protein interaction networks across species to infer protein complexes th...2300 days ago
