Results for "splicing"
Blogs
Computer simulation of genetic mechanism !!
...S BEERS was designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct different isoforms and alternate splicing from RNA-Seq data http://cbil...2974 days ago
Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016
...alization of RNA-Seq data. The workflow includes Transcriptome / Genome alignment, Differential expression analysis with Statistical approach and Splicing events detection. Strand NGS...2754 days ago
- +1 more Blogs
Bookmarks
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...The topics of interest include (and are not limited to): Genome analysis: Genome assembly, genome annotation, gene finding, alternative splicing, EST analysis and comparative...3498 days ago
RNA-Seq De novo Assembly Using Trinity
...each representing the transcriptional complexity at at a given gene or locus, and then processes each graph independently to extract full-length splicing isoforms and to tease apart t...2964 days ago
- +4 more Bookmarks
Pages
Genome Assembly Tools and Software - PART2 !!
...nce of alternative isoforms. It achieves this by using an array of hash lengths, a dynamic filtering of noise, a robust resolution of alternative splicing events, and the efficient mer...2685 days ago
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...mlBEERS BEERS was designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct different isoforms and alternate splicing from RNA-Seq data http://cbil...3736 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...nclude: Gene expression including alternative splicing, miRNA expression, Genome Wid...Output: ESEfinder Description: Exonic Splicing Enhancer; useful for interpre...ine PESX Description: Putative Exonic Splicing Enhancers/Silencers; (Can&rsq...2908 days ago
- +3 more Top-level pages
Wire posts
Opportunity posts
Postdoc Positions - Mammalian Transcriptome Evolution at SIB
...p species (e.g., birds). Topics of current projects based on these data include the origins and/or evolution of protein-coding genes, alternative splicing, microRNAs, long noncoding RN...3918 days ago
ResearchLabs posts
The Laboratoire de genomique fonctionelle
...l potential genes. In mammals this task is formidable given that a single gene can produce numerous protein isoforms through alternative pre-mRNA splicing. Protein isoforms from a sing...3947 days ago
- ...S. cerevisiae, C. elegans or mouse. Using genome-scale genotyping of natural polymorphisms in S. cerevisiae and human populations. Alternative splicing and its relationship to prote...
3707 days ago
- +1 more ResearchLabs posts
Video
Dr. Ken Buetow: IS & Personalized Medicine Lecture-Part 1
...ertion/deletion variation, translocations, and rearrangements. In application to transcriptome data, these methods facilitate identification of splicing and alternative transcripts....3870 days ago
Tags
What Junk DNA? It’s an Operating System
The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as “junk DNA,” is more than functionless, space-filling material that happens to make up nearly 98% of the genome. The paper adds to a growing body of knowledge ...Tags: Junk DNA, RNA, bioinformatics, sequencing, intron, granulocytes, splicing, gene expression
3911 days ago
- Ability to detect, quantify, and visualize complex and de-novo splicing variations from RNASeq. MAJIQ’s accuracy compares favorably to other algorithms. MAJIQ 2 is *way* faster, more memory and I/O efficient New visualization (VOILA 2.0) Ability to analyze hundreds and thousands ...
Tags: Majiq, Voila, detect, quantify, visualize, complex, de-novo, splicing, variations, RNASeq
1395 days ago
