Results for "structure analysis"
Top-level pages
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RN...hylogenetic trees using SNPs (based on k-mer analysis) Software (C) https://sourc.../mash Kraken Taxonomic assignment in metagenome analysis by exact k-mer search; L...2377 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in t...e useful links: Single Cell RNAseq data analysis Tutorial A step-by-step workflow for low-level analysis of single-cell RNA-seq data...on and evaluation in single-cell RNA-seq analysis https://github.com/zji90/TSC...2357 days ago
- ...f applications, but no single analysis pipeline can be used in all c...e major steps in RNA-seq data analysis, including experimental desig...ernative splicing, functional analysis, gene fusion detection and eQ...ene and transcript expression analysis of RNA-seq experiments with T...
2357 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the...and provides detailed annotation and pathway analysis. Takes several hours per geno...want to do functional profiling and pathway analysis of your genome(s)… whi...2338 days ago
List of visualization tools for network biology
...om/articles/sections/networks-analysis. Following are the list of...icient integrated multi-level analysis of microarray, sequence, regu...Igraph Collection of network analysis tools with the emphasis on ef...Automatic reconstruction and analysis of biological networks and Pe...2294 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for s...final results but also for improving analysis protocols, testing data quali...ng result drafts. Its integration in analysis pipelines allows the optimiza...ion tools, which could be useful for analysis and interpretation of re...2290 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformatician to the frequently used tools for NGS analysis as well as giving experience...2286 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, a...increasing interest in developing new methods for their computational analysis. Following are the list of...2280 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allows biologists to...very intuitive workflow for the analysis and visualization of RNA-Seq...gnment, Differential expression analysis, Splicing events and gene fus...pports large scale RNA-Seq data analysis too. The tool also supports b...2270 days ago
Python learning resources for bioinformatics and computational biologist !
...n is great for backend web development, data analysis, artificial intelligence, and...Python Composing Programs (3.x) Data Structures and Algorithms in Python&nbs...F) Problem Solving with Algorithms and Data Structures using Python - Bradley...2261 days ago
