Results for "swift"
Bookmarks
jackalope: A swift, versatile phylogenomic and high-throughput sequencing simulator
...ns include sequencing errors, mapping qualities, multiplexing, and optical/PCR duplicates. All outputs can be written to standard file formats. A swift, versatile phylogenomic and h...1749 days ago
MIKE: an ultrafast, assembly-, and alignment-free approach for phylogenetic tree construction
MIKE (MinHash-based k-mer algorithm). This algorithm is designed for the swift calculation of the Jaccard coefficient directly from raw sequencing reads and enables the construc...30 days ago
Pages
Introduction to Bioinformatics
Bioinformatics (Genomics) Biocomputing in a Nutshell. Biologist's Guide to Internet Resources Computational Molecular Biology Course Course on Bioinformatics EM...3924 days ago
Top-level pages
Commercial and public next-gen-seq (NGS) software
...site.mgrc.com.my:8080/sxo...ligoSearch.php)The SWIFT suit is a software collection...omparison. It contains the following programs: SWIFT — fast local alignment...Varadarajan A, Passalacqua KD and Bergman NH. SWIFT - The SWIFT suit is a softwar...3522 days ago
Software packages for next gen sequence analysis
...educe the set of possible matches, drastically increasing search speed. Authors are Ondov B, Varadarajan A, Passalacqua KD and Bergman NH. * SWIFT - The SWIFT suit is a software collection...3246 days ago
Tags
jackalope: A swift, versatile phylogenomic and high-throughput sequencing simulator
jackalope simply and efficiently simulates (i) variants from reference genomes and (ii) reads from both Illumina and Pacific Biosciences (PacBio) platforms. It can either read reference genomes from FASTA files or simulate new ones. Genomic variants can be simulated using summary statistics, phyl...Tags: jackalope, swift, versatile, phylogenomic, high-throughput, sequencing, simulator, ngs
1749 days ago
