Results for "targeted sequencing"
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief description and homepage...r specified models. http://research.nhgri.nih.gov/gasp/GemSIM Next generation sequencing read simulator http://sourcef...3750 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bioinformaticians mung and wrangle around massive amounts of genomics text. There are several "standardized" file format...3641 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analys...tionality for short read sequences produced by high throughput sequencing technologies. While support is provided for many sequencing technologies, this package is...3638 days ago
Commercial and public next-gen-seq (NGS) software
...s library and a set of script targeted to NGS. There are modules to: c...obtained from next-generation sequencing machines (specifically that o...s, emerged by next-generation sequencing technology, back to the refer...ompleted will handle next-gen sequencing data. A partially implemented...3532 days ago
- Since few years miRNA has shown to play impo...nd tools related with miRNA: miRNA Sequencing data analysis : http://t... http://starbase.sysu.edu.cn/ Sequencing based miRNA DB : http://...ction.html Idea of analysing miRNA Sequencing data : http://www.illumina.c...
3509 days ago
Apps for Busy Bioinformatics Researchers !!!
...e opening and analysis of DNA sequencing files - ab1. It includes hand...determine the quality of your sequencing files. This app works with c...e opening and analysis of DNA sequencing files - ab1. It includes hand...yzing cases with whole genome sequencing data that have been published...3554 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to the basics of R, focusing on a...lication specific tasks. e.g. analysis of microarray experiments and Next-Gen sequencing (bioconductor: including Bios...3374 days ago
Software packages for next gen sequence analysis
...Solutions for Next Generation Sequencing data analysis. * JMP Genomics...obtained from next-generation sequencing machines (specifically that o...s, emerged by next-generation sequencing technology, back to the refer...es from the 454 Life Sciences sequencing machines. It was designed to...3255 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to understand the different processes inside a cell: proteins exert their...over the web http://www.biotapestry.org/ Caleydo Visual analysis framework targeted a...2300 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...metagenomics sample assembly, targeted resequencing, exome alignment, gene panels...riant detection for low-depth targeted NGS data; python module or comm...rdquo;can accept a variety of sequencing inputs and configurations&rdq...nfrastructure for analysis of targeted- and whole genome re-sequencing...2922 days ago
