Results for "taxonomy"
Top-level pages
...nomics experiments (e.g. expression data, yeast two–hybrid screens). But bioinformatic analysis is also applied to various other data, e.g. taxonomy trees, relationship data from...3957 days ago
Phylogenetic for Bioinformatics
...r field of systematics, which also includes taxonomy. Taxonomy is the science of naming and...be encountered. Proponents even claim that taxonomy was previously based on morph...al Biochemistry Research Group Digital Taxonomy Hennig 86 Hyperclea...3956 days ago
List of bioinformatics open source projects/software.
...nd graph based database built around most data available in UniProt KB(Swiss-Prot + TrEMBL), Gene Ontology (GO), UniRef (50,90,100), RefSeq, NCBI taxonomy, and Expasy Enzyme DB Biocli...3767 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...tat, and is then called an adaptive radiation. rank -- In traditional taxonomy, taxa are ranked according to...Systematics is usually divided into the two areas of phylogenetics and taxonomy. taxon -- Any named group of...2472 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...s Software (Python) http://jordan.biology.gatech.edu/page/software/stringMLST Taxonomer k-mer-based ultrafast metagenomics tool for assigning taxonomy to sequencing reads from clin...2381 days ago
Some useful Bioinformatics links
...deletions, from raw set(s) of reads. https://github.com/GATB/DiscoSnp De novo assembly | Oxford Nanopore Technologies https://nanoporetech.com/taxonomy/term/131 De novo long-read as...2251 days ago
Understanding BLASTn output format 6 !
...ery and subject frames separated by a '/'qframe Query framesframe Subject framebtop Blast traceback operations (BTOP)staxids Subject Taxonomy ID(s), separated by a ';'ssci...2148 days ago
Frequent parameters for bioinformatics tools !
...e MeDuSa -random 100 Prokka --usegenus --force --addgenes --rfam --rawproduct cmsearch (taxonomy, 16S) --rfam --noali blastn (taxonomy, 16S) -evalue 1E-10 ...1295 days ago
