Results for "transcriptome"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...MedCentral Biases in Illumina transcriptome sequencing caused by random h...s 41:21–32, 2013 PubMed Transcriptome analysis Assembly and compar...ds.] Optimization of de novo transcriptome assembly from next-generation...TS and R-Cloud for analysis of transcriptome data3773 days ago
Commercial and public next-gen-seq (NGS) software
...caller" Transcriptomics ERANGE - Mapping and Quantifying Mammalian Transcriptomes by RNA-Seq. Supports Bowtie,...versity of California, BerkeleyNGS-Trex: Next Generation Sequencing Transcriptome profile explorer http://www.b...3513 days ago
Comprehensive list of visualization tools for biological pathways
...ene-expression data and integrated biological pathway resources using SVG http://tinyurl.com/ArrayXPath/ GEPAT Integrated analysis of transcriptome data in genomic, proteomic an...2281 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...peline for assembly, alignment, variant calling and analysis of NGS data Supported workflows include: reference-guided and de novo genome and transcriptome assembly and analysis, metage...2903 days ago
Genome Assembly Tools and Software - PART1 !!
.... TransPS 1.1.0 – Transcriptome Post Scaffolding TransPS i...st-processing of pre-assembled transcriptomes using reference based method...y and an independently derived transcriptome assembly. Circlator 1.1....for CLEavage site Analysis of Transcriptomes. CLEAT is designed to work o...2680 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...g RNA-seq data (uses k-mers) https://combine-lab.github.io/salmon/ RNA-Skim RNA-seq quantification at transcript-level (partitions the transcriptome into disjoint transcript clus...2365 days ago
- RNA-sequencing (RNA-seq) has a wide variety of applications, but no single analysis pipeline can be used in all cases. We review all of the major steps in RNA-seq data ana...
2345 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...very intuitive workflow for the analysis and visualization of RNA-Seq data. This webinar will give an overview of the workflow which includes Transcriptome/ Genome alignment, Differenti...2258 days ago
