Results for "transcriptomic"
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CNIDARIA: fast, reference-free phylogenomic clustering
...s: We present Cnidaria, a practical tool for clustering genomic and transcriptomic data with no limitation on ge...distances. We successfully simultaneously clustered 169 genomic and transcriptomic datasets from 4 kingdoms, ach...2891 days ago
- This website and accompaning documents are intended as a tool to help researchers dealing with non-model organisms acquire and process transcriptomic high-throughput sequencing data witho...
2601 days ago
Grinder / Biogrinder - A versatile omics shotgun and amplicon sequencing read simulator
...nce libraries based on DNA, RNA or proteic reference sequences provided in a FASTA file. Grinder can produce genomic, metagenomic, transcriptomic, metatranscriptomic, proteomic, metaproteomic sho...2549 days ago
Heatmapper: web-enabled heat mapping for all
...ferent data types and applications. Heatmapper allows users to generate, cluster and visualize: 1) expression-based heat maps from transcriptomic, proteomic and metabolomic ex...2054 days ago
- An increasing number of studies are mapping protein binding and nucleotide modifications sites throughout the transcriptome. Often, these sites cluster in certain regions o...
2019 days ago
MAGIC: A tool for predicting transcription factors and cofactors driving gene sets using ENCODE data
...ate Early Gene expression levels. In summary, MAGIC is a standalone application that produces meaningful predictions of TFs and cofactors in transcriptomic experiments. More at ht...1267 days ago
