Results for "tree"
Bio-Scripts
Install htop in elementary/Ubuntu OS !
neelam@neelam-Lenovo-ideapad-320-15ISK:~$ sudo apt-get install htop Reading package lists... Done Building dependency tree Reading state information... Done The following...1152 days ago
Parse the NCBI taxonomy database with Perl !
...(@taxa2) {print $_->scientific_name; print "**";} #my $ancestor_taxon = $dbh->ancestor($nam); print "$ancestor_taxon->id ****"; #my $tree = $dbh->get_tree('human'); print $tree->name;...1173 days ago
Perl script to get all the descendent in a tree !
use warnings; use Bio::DB::Taxonomy; #Rotifera 10190 # Get one from a NCBI taxonomy database my $dbh = Bio::DB::Taxonomy->new(-source => 'flatfile',...1165 days ago
- ...ad-320-15ISK:~/Downloads/setu/setu$ sudo apt install r-base-core [sudo] password for vik: Reading package lists... Done Building dependency tree Reading state informa...
1055 days ago
- Lenovo-ideapad-320-15ISK:~/Downloads/MyTools/$ sudo apt install jellyfish Reading package lists... Done Building dependency tree Reading state information... Done The fo...
982 days ago
- $ sudo apt install art-nextgen-simulation-tools [sudo] password for neelam: Reading package lists... Done Building dependency tree Reading state information... Done The...
665 days ago
Genome Scaffolding and gap filling !
scaffolding with ARCS v1.0.3 (−c3, −l,4, −a,0.9, −z500, −m50, −20 000, −e30000, −s90). https://github.com/bcgsc/arcs Next, automated gap filling was performed using Sealer v2.0.1 (−L150, -P10, −k75-115 [step = 10]) https://github.com/bcgsc/abyss/tree/sealer-release621 days ago
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